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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9621609 chr22:33347552 A/G CYTSA chr22:24666786-24813707:+ 0.63 10.12 6.14E-22 Box Plot
THCA rs9621609 chr22:33347552 A/G DDT chr22:24313554-24322660:- 0.45 6.92 1.42E-11 Box Plot
THCA rs9621609 chr22:33347552 A/G DDX17 chr22:38879445-38903665:- 0.49 7.19 2.48E-12 Box Plot
THCA rs9621609 chr22:33347552 A/G DEPDC5 chr22:32149937-32303020:+ 0.6 6.89 1.74E-11 Box Plot
THCA rs9621609 chr22:33347552 A/G DGCR14 chr22:19117792-19132197:- 0.47 6.27 7.88E-10 Box Plot
THCA rs9621609 chr22:33347552 A/G DGCR2 chr22:19023795-19109967:- 0.62 6.78 3.6E-11 Box Plot
THCA rs9621609 chr22:33347552 A/G DNAL4 chr22:39174513-39190203:- 0.71 9.02 4.61E-18 Box Plot
THCA rs9621609 chr22:33347552 A/G DRG1 chr22:31795509-31926620:+ 0.64 8.22 1.93E-15 Box Plot
THCA rs9621609 chr22:33347552 A/G EFCAB6 chr22:43924624-44208217:- 0.49 7.16 3.13E-12 Box Plot
THCA rs9621609 chr22:33347552 A/G EIF3D chr22:36906897-36925483:- 0.59 8.11 4.28E-15 Box Plot
THCA rs9621609 chr22:33347552 A/G EIF3L chr22:38244875-38285414:+ 0.68 8.31 9.91E-16 Box Plot
THCA rs9621609 chr22:33347552 A/G EIF4ENIF1 chr22:31832963-31892094:- 0.71 8.69 5.9E-17 Box Plot
THCA rs9621609 chr22:33347552 A/G EP300 chr22:41487790-41576083:+ 0.52 9.06 3.33E-18 Box Plot
THCA rs9621609 chr22:33347552 A/G EWSR1 chr22:29663998-29696515:+ 0.54 6.62 9.53E-11 Box Plot
THCA rs9621609 chr22:33347552 A/G FAM10A4 chr13:50746154-50747749:+ 0.63 8.19 2.44E-15 Box Plot